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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899867.1_cds_XP_016449898.1_44400
CDS Infomation

[gene=LOC107774767] [db_xref=GeneID:107774767] [protein=MADS-box protein SOC1-like] [protein_id=XP_016449898.1] [location=complement(join(36373..36519,37054..37092,37406..37447,37613..37712,38105..38166,38262..38346,49023..49204))] [gbkey=CDS]
Sequence

ATGGTGAGAGGAAAAACTCAGATGAGGCGAATCGAAAACGCGACAAGAAGGCAAGTCACT
TTCTCTAAGAGGAGAAATGGGCTGTTAAAGAAAGCCTTTGAGCTTTCAGTTCTTTGTGAT
GCTGAAGTTGGATTGATTATTTTCTCTCCTAGAGGCAAGCTCTATGAATTTGCTAGCTCA
AGCATGCAGGAGATTATGGAGCGTTACCGGAAGCATAATGAAGATGTTCAGGGAGAAAAA
CAACCTGTGGAACATAATAATATGCAGAATTTGAAGCATGAAACAACAACCTTGATGAAG
AAGATCGAGCTTCTTGAAACATCTAAAAGGAAGCTCTTGGGAGAAGGTTTAGGATCCTGC
AGTTTTACAGAACTACAACAGATAGAGCATCAGTTGGAACAGAGTCTCAACGTTATCCGT
GCAAGAAAGATGGAAGTCTTTAGGGAACAGATTGGGAGATTGAAAGAAAACGTGAAAGAC
CTTTCATCTGAAAATGCAATGTTGGAGAAGTTTGATGATCTTGAACAGCCAAAAGCATCA
AGTGCGGAAGATCAGGGAGAAGACCTTTCAATAGAAGGTAGTGAAAAATCGGATGTAGAG
ACTGAATTATTTATTGGACTACCAGAATGCAGAACGAAGCGCGCCCTACAGAATTGA

Peptide Sequence

PEP ID

XP_016449898.1
PEP Infomation

PREDICTED: MADS-box protein SOC1-like [Nicotiana tabacum]
Sequence

MVRGKTQMRRIENATRRQVTFSKRRNGLLKKAFELSVLCDAEVGLIIFSPRGKLYEFASS
SMQEIMERYRKHNEDVQGEKQPVEHNNMQNLKHETTTLMKKIELLETSKRKLLGEGLGSC
SFTELQQIEHQLEQSLNVIRARKMEVFREQIGRLKENVKDLSSENAMLEKFDDLEQPKAS
SAEDQGEDLSIEGSEKSDVETELFIGLPECRTKRALQN

Transcript Sequence

Gene sequence data has not been registered.